Publications from the PRL, 2010

Bordowitz JR, Whitaker MJ, Montgomery BL (2010) Independence and interdependence of the photoregulation of pigmentation and development in Fremyella diplosiphon. Commun Integr Biol 3(2), in press Abstract

Publications from the PRL, 2009

Adhikari N, Orler R, Chory J, Froehlich JE, Larkin RM (2009) Porphyrins promote the association of GENOMES UNCOUPLED 4 and a Mg-chelatase subunit with chloroplast membranes. J Biol Chem 284: 24783-24796 Abstract

Aung K, Hu J (2009) The Arabidopsis peroxisome division mutant pdd2 is defective in the DYNAMIN-RELATED PROTEIN3A (DRP3A) gene. Plant Signal Behav 4(6): 542-544 Abstract

Awai K, Lechno-Yossef S, Wolk CP (2009) Heterocyst envelope glycolipids. In H Wada, N Murata, eds, Lipids in Photosynthesis: Essential and Regulatory Functions. Springer, Heidelberg. In press

Bakermans C, Sloup RE, Zarka DG, Tiedje JM, Thomashow MF (2009) Development and use of genetic system to identify genes required for efficient low-temperature growth of Psychrobacter arcticus 273-4. Extremophiles. 13(1): 21-30 Abstract

Beckers GJ, Jaskiewicz M, Liu Y, Underwood WR, He SY, Zhang S, Conrath U (2009) Mitogen-activated protein kinases 3 and 6 are required for full priming of stress responses in Arabidopsis thaliana. Plant Cell 21(3): 944-953 Abstract

Boller T, He SY (2009) Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens. Science 324: 742-744 Abstract

Brach T, Soyk S, Muller C, Hinz G, Hell R, Brandizzi F, Meyer AJ (2009) Non-invasive topology analysis of membrane proteins in the secretory pathway. Plant J 57: 534-541 Abstract

Büttner D, He SY (2009) Type III protein secretion in plant pathogenic bacteria. Plant Physiol 150: 1656-1664 Full Update

Chatre L, Matheson LA, Jack AS, Hanton SL, Brandizzi F (2009) Efficient mitochondrial targeting relies on co-operation of multiple protein signals in plants. J Exp Bot 60: 741-749 Abstract [Article featured in: Logan DC (2009) Known knowns, known unknowns, unknown unknowns and the propagation of scientific enquiry. J Exp Bot 60: 712-714]

Chung HS, Howe GA (2009) A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis. Plant Cell 21: 131-145 Abstract

Chung HS, Niu Y, Browse J, Howe GA (2009) Top hits in contemporary JAZ: An update on jasmonate signaling. Phytochemistry 70: 1547-1559 Abstract

Doherty CJ, Van Buskirk HA, Myers SJ, Thomashow MF (2009) Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance. Plant Cell 21: 972-984 Abstract

Faso C, Boulaflous A, Brandizzi F (2009) The plant Golgi apparatus: Last 10 years of answered and open questions. FEBS Lett, in press [doi:10.1016/j.febslet.2009.09.046] 

Faso C, Chen Y, Tamura K, Held MA, Zemelis S, Marti L, Saravanan R, Hummel E, Kung L, Miller EA, Hawes C, Brandizzi F (2009) A missense mutation in the Arabidopsis COPII coat protein Sec24A induces the formation of clusters of the endoplasmic reticulum and Golgi apparatus. Plant Cell, in press

Gao J, Ajjawi I, Manoli III A, Sawin A, Xu C, Froehlich JE, Last RL, Benning C (2009) FATTY ACID DESATURASE 4 of Arabidopsis encodes a protein distinct from classic fatty acid desaturases. Plant J, in press Abstract

Ham JH, Majerczak DR, Nomura K, Mecey K, Uribe F, He SY, Mackey D, and Coplin DL (2009) Multiple activities of the plant pathogen type III effector proteins WtsE and AvrE require WxxxE motifs. Mol Plant-Microbe Interact 22: 703-712 Abstract

Hanton SL, Matheson LA, Chatre L, Brandizzi F (2009) Dynamic organization of COPII coat proteins at endoplasmic reticulum export sites in plant cells. Plant J 57: 963-974 Abstract

Hark AT, Vlachonasios KE, Pavangadkar KA, Rao S, Gordon H, Adamakis ID, Kaldis A, Thomashow MF, Triezenberg SJ (2009) Two Arabidopsis orthologs of the transcriptional coactivator ADA2 have distinct biological functions. Biochim Biophys Acta 1789(2): 117-124 Abstract

Howe GA (20--) Update: The jasmonate receptor. In PJ Davies, ed, Plant Hormones: Biosynthesis, Signal Transduction, and Action! Kluwer Academic Publishers, The Netherlands. In press

Kaur N, Hu J (2009) Dynamics of peroxisome abundance: a tale of division and proliferation. Curr Opin Plant Biol, in press Abstract

Kaur N, Reumann S, Hu J (2009) Peroxisome biogenesis and function. In CR Somerville, EM Meyerowitz, eds, The Arabidopsis Book. American Society of Plant Biologists, Rockville, MD, in press

Koo AJK, Gao X, Jones AD, Howe GA (2009) A rapid wound signal activates systemic synthesis of bioactive jasmonates in Arabidopsis. Plant J 59: 974-986 Abstract

Koo AJK, Howe GA (2009) The wound hormone jasmonate. Phytochemistry 70: 1571-80 Abstract

Larkin RM, Ruckle ME (2008) Integration of light and plastid signals. Curr Opin Plant Biol 11: 593-599 Abstract

Luo H, Hallen-Adams HE, Walton JD (2009) Processing of the phalloidin proprotein by prolyl oligopeptidase from the mushroom Conocybe albipes. J Biol Chem  284(27): 18070-18077 Full Text

Melser S, Wattelet-Boyer V, Brandizzi F, Moreau P (2009) Blocking ER export of the Golgi SNARE SYP31 affects plant growth. Plant Signal Behav 4(10), in press Abstract

Montgomery BL (2009) Spatial-specific phytochrome responses during de-etiolation in Arabidopsis thaliana. Plant Signal Behav 4: 47–49 Full Text

Montgomery BL, Pattanaik B (2009) Regulation during adaptation of cyanobacteria to changes in iron availability: A case study of responses to iron limitation responses in Fremyella diplosiphon. Biometals: Molecular Structures, Binding Properties and Applications,in press

Nagendran S, Hallen-Adams HE, Paper JM, Aslam N, Walton JD (2009) Reduced genomic potential for secreted plant cell-wall-degrading enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei. Fungal Genet Biol 46(5): 427-435 Abstract

Obel N, Erben V, Schwarz T, Kuehnel S, Fodor A, Pauly M (2009) Microanalysis of plant cell wall polysaccharides. Mol Plant 2 (5): 922-932 Abstract

Reumann S, Quan S, Aung K, Yang P, Manandhar-Shrestha K, Holbrook D, Linka N, Switzenberg R, Wilkerson CG, Weber APM Olsen LJ, Hu J (2009) In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Plant Physiol 150: 125-143 Abstract

Reyes F, León G,  Donoso M, Brandizzi F, Weber A, Orellana A (2009) The nucleotide sugar transporters AtUTr1 and AtUTr3 are required for the incorporation of UDP-glucose into the endoplasmic reticulum and are essential for pollen development and needed for embryo sac progress in Arabidopsis thaliana. Plant J, in press

Ruckle ME, Larkin RM (2009) Plastid signals that regulate photomorphogenesis in Arabidopsis thaliana are dependent on GENOMES UNCOUPLED 1 and cryptochrome 1. New Phytol 182: 367-379 Abstract

Speth EB, Melotto M, Zhang W, Assmann SM, He SY (2009b) Crosstalk in pathogen and hormonal regulation of guard cell signaling. In K Yoshioka, K Shinozaki, eds, Signal Crosstalk in Plant Stress Responses. Blackwell Publishers, Wiley-Blackwell, John Wiley and Sons, Ltd, pp 96-112

Speth EB, Imboden L, Hauck P, He SY (2009) Subcellular localization and functional analysis of the Arabidopsis GTPase RabE. Plant Physiol 149(4): 1824-1837 Abstract

van Erp H, Walton JD (2009) Regulation of the cellulose synthase-like gene family by light in the maize mesocotyl. Planta 229(4): 885-897 Abstract

Warnasooriya SN, Montgomery BL (2009) Detection of spatial-specific phytochrome responses using targeted expression of biliverdin reductase in Arabidopsis thaliana. Plant Physiol 149: 424-433 Abstract

Whitaker MJ, Bordowitz JR, Montgomery BL (2009) CpcF-dependent regulation of pigmentation and development in Fremyella diplosiphon. Biochem Biophys Res Commun 389: 602–606 Full Text

Wight WD, Kim KH, Lawrence CB, Walton JD (2009) Biosynthesis and role in virulence of the histone deacetylase inhibitor depudecin from Alternaria brassicicola.  Mol Plant-Microbe Interact 22(10): 1258-1267 Abstract

Zeng W, Gao X, Jones D, He SY (2009) A genetic screen for Arabidopsis mutants defective in resistance to coronatine-deficient Pseudomonas syringae pv. tomato DC3000. Plant Physiol, in press

Zhang X, Hu J (2009) Two small protein families, DYNAMIN-RELATED PROTEIN 3 and FISSION 1, are required for peroxisome fission in Arabidopsis. Plant J 57: 146-159 Abstract

Publications, 2008

Boeglin WE, Itoh A, Zheng Y, Coffa G, Howe GA, Brash AR (2008) Investigation of substrate binding and product stereochemistry issues in two linoleate 9-lipoxygenases. Lipids 14: 979-987 Abstract

Bordowitz JR, Montgomery BL (2008) Photoregulation of cellular morphology during complementary chromatic adaptation requires sensor-kinase-class protein RcaE in Fremyella diplosiphon. J Bacteriol 190: 4069-4074 Full Text

Boulaflous A, Faso C, Brandizzi F (2008) Deciphering the Golgi apparatus: From imaging to genes. Traffic 9: 1613-1617 Abstract

Bräutigam A, Shrestha RP, Whitten D, Wilkerson CG, Carr KM, Froehlich JE, Weber AP (2008) Low-coverage massively parallel pyrosequencing of cDNAs enables proteomics in non-model species: comparison of a species-specific database generated by pyrosequencing with databases from related species for proteome analysis of pea chloroplast envelopes. J Biotechnol 136(1-2):44-53 Abstract

Browse J, Howe GA (2008) Update on jasmonate signaling: New weapons and a rapid response against insect attack. Plant Physiol 146: 832-838 Full Text

Cavalier DM, Lerouxel O, Neumetzler L, Yamauchi K, Reinecke A, Freshour G, Zabotina OA, Hahn MG, Burgert I, Pauly M, Raikhel NV, Keegstra K (2008) Disrupting two Arabidopsis thaliana xylosyltransferase genes results in plants deficient in xyloglucan, a major primary cell wall component. Plant Cell 20(6): 1519-1537 Abstract

Chen H, Gonzales-Vigil E, Howe GA (2008) Action of plant defensive enzymes in the insect midgut. In A Schaller, ed, Induced Plant Resistance to Herbivory. Springer Publishing, New York

Chung HS, Koo AJK, Gao X, Jayanty S, Thines B, Jones AD, Howe GA (2008) Regulation and function of Arabidopsis JASMONATE-ZIM domain genes in response to wounding and herbivory. Plant Physiol 146: 952-964 Abstract

Desai M, Hu J (2008) Light induces peroxisome proliferation in Arabidopsis seedlings through the photoreceptor phytochrome A, the transcription factor HY5 HOMOLOG, and the peroxisomal protein PEROXIN11b. Plant Physiol 146: 1117-1127 Abstract

Farmer ET, Howe GA, Pearce G, Schaller A (2008) Obituary: Clarence A. "Bud" Ryan. Phytochemistry 69: 1454-1456 Full Text

Gao, H, Brandizzi, F, Benning, C, and Larkin, RM (2008) A membrane-tethered transcription factor defines a branch of the heat stress response in Arabidopsis thaliana. Proc Natl Acad Sci USA 105: 16398-16403 Abstract

Glynn JM, Froehlich JE, Osteryoung KW (2008) Arabidopsis ARC6 coordinates the division machineries of the inner and outer chloroplast membranes through interaction with PDV2 in the intermembrane space. Plant Cell 20(9): 2460-2470 Abstract

Hanton SL, Chatre L, Matheson LA, Rossi M, Held MA, Brandizzi F (2008) Plant Sar1 isoforms with near-identical protein sequences exhibit different localisations and effects on secretion. Plant Mol Biol 67: 283-294 Abstract

Held MA, Boulaflous A, Brandizzi F (2008) Advances in fluorescent protein-based imaging for the analysis of plant endomembranes. Plant Physiol 147: 1469-1481 Full Text

Howe GA, Jander G (2008) Plant immunity to insect herbivores. Annu Rev Plant Biol 59: 41-66 Abstract

Howe GA, Schaller A (2008) Direct defense induced by wounding and herbivores. In A Schaller, ed, Induced Plant Resistance to Herbivory. Springer Publishing, New York

Hu J, Desai M (2008) Light control of peroxisome proliferation during Arabidopsis photomorphogenesis. Plant Signal Behav 3(10): 801-803 Abstract

Jander G, Howe GA (2008) Plant interactions with arthropod herbivores: State of the field. Plant Physiol 146: 801-803 Full Text

Jensen J, Sorensen S, Harholt J, Geshi N, Sakuragi Y, Moller I, Zandleven J, Bernal AJ, Jensen NB, Sorensen C, Pauly M, Beldman G, Willats WGT, Scheller HV (2008) Identification of a xylogalacturonan xylosyltransferase involved in pectin biosynthesis in Arabidopsis. Plant Cell 20: 1289-1302 Abstract

Katsir L, Chung HS, Koo AJK, Howe GA (2008) Jasmonate signaling: a conserved mechanism of hormone sensing. Curr Opin Plant Biol 11: 428-435 Abstract

Katsir L, Schilmiller AL, Staswick PE, He SY, Howe GA (2008) COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine. Proc Natl Acad Sci U S A 105: 7100-7105 Abstract

Larkin RM, Ruckle ME (2008) Integration of light and plastid signals. Curr Opin Plant Biol 11, 593-599 Abstract

Leboeuf E, Immerzeel P, Gibon Y, Steup M, Pauly M (2008) High throughput functional assessment of polysaccharide-active enzymes using MALDI-TOF mass spectrometry as exemplified on plant cell wall polysaccharides, Anal Biochem 373 (1): 9-17 Abstract

Lo S-F, Yang S-Y, Chen K-T, Hsing Y-I, Jan A.D. Zeevaart, Chen L-J, Yub S-M (2008) A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice. Plant Cell 20: 2603-2618 Abstract

Matheson LA, Suri SS, Hanton SL, Chatre L, Brandizzi F (2008) Correct targeting of plant ARF GTPases relies on distinct protein domains. Traffic 9: 103-120 Abstract

McAndrew RS, Olson BJ, Kadirjan-Kalbach DK, Chi-Ham CL, Vitha S, Froehlich JE, Osteryoung KW (2008) In vivo quantitative relationship between plastid division proteins FtsZ1 and FtsZ2 and identification of ARC6 and ARC3 in a native FtsZ complex. Biochem J 412(2): 367-378 Abstract

Melotto M, Mecey C, Niu Y, Chung HS, Katsir L, Yao J, Zeng W, Thines B, Staswick P, Browse J, Howe G, He SY (2008) A critical role of two positively charged amino acids in the Jas motif of Arabidopsis JAZ proteins in mediating coronatine- and jasmonoyl isoleucine-dependent interactions with the COI1 F-box protein. Plant J 55: 979-988 Abstract

Melotto M, Underwood W, He SY (2008) Role of stomata in plant innate immunity and foliar bacterial diseases. Annu Rev Phytopathol 46: 101-122 Abstract

Montgomery BL (2008) Shedding new light on the regulation of complementary chromatic adaptation. Cent Eur J Biol 3: 351-358 Abstract

Montgomery BL (2008) Right place, right time: Spatiotemporal light regulation of plant growth and development. Plant Signal Behav 3(12): 1053-1060 Abstract

Montgomery BL (2008) Spatial-specific phytochrome responses during de-etiolation in Arabidopsis thaliana. Plant Signal Behav 4: 47-49 Abstract

Navarro L, Jay F, Nomura K, He SY, Voinnet O (2008) Suppression of the MicroRNA pathway by bacterial effector proteins. Science 321: 964-967 Abstract

Pauly M, Keegstra K (2008) Physiology and metabolism 'Tear down this wall'. Curr Opin Plant Biol 11(3): 233-235 Full Text

Pauly M, Keegstra K (2008) Cell-wall carbohydrates and their modification as a resource for biofuels. Plant J 54: 559-568 Abstract

Pino MT, Skinner JS, Jeknic Z, Hayes PM, Soeldner AH, Thomashow MF, Chen T (2008) Ectopic AtCBF1 over-expression enhances freezing tolerance and induces cold acclimation-associated physiological modifications in potato. Plant Cell Environ 31(4): 393-406 Abstract

Ponder MA, Thomashow MF, Tiedje JM (2008) Metabolic activity of Siberian permafrost isolates, Psychrobacter arcticus and Exiguobacterium sibiricum, at low water activities. Extremophiles 12(4): 481-490 Abstract

Qin X, Yang SH, Kepsel AC, Schwartz SH, Zeevaart JAD (2008) Evidence for abscisic acid biosynthesis in Cuscuta reflexa, a parasitic plant lacking neoxanthin. Plant Physiol 147: 816–822 Full Text

Sieben C, Mikosch M, Brandizzi F, Homann U (2008) Interaction of the K(+) channel KAT1 with the COPII coat component Sec24 depends on a di-acidic ER export motif. Plant J 56: 997-1006 Abstract

Wen F, Celoy RM, Nguyen T, Zeng W, Keegstra K, Immerzeel P, Pauly M, Hawes MC (2008) Inducible expression of Pisum sativum xyloglucan fucosyltransferase in the pea root cap meristem, and effects of antisense mRNA expression on root cap cell wall structural integrity. Plant Cell Rep 27(7): 1125-1135 Abstract

Xu X, Elhai J, Wolk CP (2008) Transcriptional and developmental responses by Anabaena to deprivation of fixed nitrogen. In A Herrero, E Flores, eds, Genomics and Molecular Biology of Cyanobacteria. Horizon Scientific Press, Norwich, UK, pp 383-422

Zabotina OA, van de Ven WT, Freshour G, Drakakaki G, Cavalier D, Mouille G, Hahn MG, Keegstra K, Raikhel NV (2008) Arabidopsis XXT5 gene encodes a putative alpha-1,6-xylosyltransferase that is involved in xyloglucan biosynthesis. Plant J 56(1): 101-115 [Erratum in: Plant J 2009 57(2): 386] Abstract

Zeevaart JAD (2008) Leaf-produced floral signals. Curr Opin Plant Biol 11: 541-547 Abstract

Zeng W, Keegstra K (2008) AtCSLD2 is an integral Golgi membrane protein with its N-terminus facing the cytosol. Planta 228(5): 823-838 Abstract

Zhang W, He SY, Assmann SM (2008) The plant innate immunity response in stomatal guard cells invokes G-protein-dependent ion channel regulation. Plant J 56:984-96 Abstract

Zhang X, Hu J (2008) FISSION1A and FISSION1B proteins mediate the fission of peroxisomes and mitochondria in Arabidopsis. Mol Plant 1(6): 1036-1047 Abstract

Zhao J, Wolk CP (2008) Developmental biology of heterocysts, 2006. In D Whitworth, ed, Myxobacteria: Multicellularity and Differentiation. Am Soc Microbiol, Washington, DC., pp 397-418

Publications, 2007

Andre C, Froehlich JE, Moll MR, Benning C (2007) A heteromeric plastidic pyruvate kinase complex involved in seed oil biosynthesis in Arabidopsis. Plant Cell 19: 2006-2022 Abstract

Awai K, Wolk CP (2007) Identification of the glycosyl transferase required for synthesis of the principal glycolipid characteristic of heterocysts of Anabaena sp. strain PCC 7120. FEMS Microbiol Lett 266: 98-102 Abstract

Bakermans C, Tollaksen SL, Giometti CS, Wilkerson C, Tiedje JM, Thomashow MF (2007) Proteomic analysis of Psychrobacter cryohalolentis K5 during growth at subzero temperatures. Extremophiles 11: 343-354 Abstract

Bernal AJ, Jensen JK, Harholt J, Sorensen S, Moller I, Blaukopf C, Johansen B, de Lotto R, Pauly M, Scheller HV, Willats WGT (2007) Disruption of AtCSLD5 results in reduced growth, reduced xylan and homogalacturonan synthase activity and altered xylan occurrence in Arabidopsis. Plant J 52: 791-802 Abstract

Bray-Speth E, Lee YN, He SY (2007) Pathogen virulence factors as potential molecular probes of basic plant cellular functions. Curr Opin Plant Biol 10: 580-586 Abstract
 
Chen H, Gonzales-Vigil E, Wilkerson CG, Howe GA (2007) Stability of plant defense proteins in the gut of insect herbivores. Plant Physiol 143: 1954-1967 Abstract

Cocuron J-C, Lerouxel O, Drakakaki G, Alonso AP, Liepman AH, Keegstra K, Raikhel N, Wilkerson CG (2007) A gene from the cellulose synthase-like C family encodes a β-1,4 glucan synthase. Proc Natl Acad Sci USA 140: 8550-8555 Abstract

Cuomo CA, Guldener U, Xu JR Trail, F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC,  Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Munsterkotter M, Nelson D, O'Donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko LV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC (2007) The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Science 317: 1400-1402 Abstract

Egelund J, Obel N, Ulvskov P, Geshi N, Pauly M, Bacic A, Peterson BL (2007) Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue. Plant Mol Biol 64(4): 439-451  Abstract  

Fauré R, Cavalier D, Keegstra K, Cottaz S, Driguez H (2007) Glycosynthase-assisted synthesis of xylo-gluco-oligosaccharide probes for α-xylosyltransferases. Eur J Org Chem 2007: 4313-4319 Abstract

Flores E, Pernil R, Muro-Pastor AM, Mariscal V, Maldener I, Lechno-Yossef S, Fan Q, Wolk CP, Herrero A (2007) Septum-localized protein required for filament integrity and diazotrophy in the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. J Bacteriol 189: 3884-3890 Abstract

Fouquaert E, Hanton SL, Brandizzi F, Peumans WJ, Van Damme EJM (2007) Localization and topogenesis studies of cytoplasmic and vacuolar homologs of the Galanthus nivalis agglutinin: linking molecular to functional evolution of a mannose-binding domain. Plant Cell Physiol 48: 1010-1021 Abstract

Hallen HE, Luo H, Scott-Craig JS, Walton JD (2007) A gene family encoding the major toxins of lethal Amanita mushrooms. Proc Natl Acad Sci USA 104: 19097-19101 Abstract

Hanton SL, Chatre L, Renna L, Matheson LA, Brandizzi F (2007) De novo formation of plant endoplasmic reticulum export sites is membrane cargo-induced and signal-mediated. Plant Physiol 143: 1640-1650 Abstract

Hanton SL, Matheson LA, Brandizzi F (2007) Studying protein export from the endoplasmic reticulum in plants. Methods Mol Biol 390: 297-308 Abstract

Hanton SL, Matheson LA, Chatre L, Rossi M, Brandizzi F (2007) Post-Golgi protein traffic in the plant secretory pathway. Plant Cell Reports 26: 1431-1438 Abstract

Hanton SL, Matheson LA, Chatre L, Brandizzi F (2007) The Golgi apparatus – A key organelle in the plant secretory pathway. Funct Plant Sci Biotechnol 1: 69-76

He SY (2007) Role of the type III protein secretion system in bacterial infection of plants.  In KA Brogden, FC Minion, TB Stanton, Q Zhang, L Nolan, MJ Wannemuehler, eds, Virulence Mechanisms of Bacterial Pathogens, 4th ed. ASM Press, Washington, DC, pp 209-220

Howe GA, Browse J (2007) Jasmonate synthesis and action in higher plants. In Encyclopedia of Life Sciences. John Wiley & Sons, Ltd: Chichester http://www.els.net/ [DOI: 10.1002/9780470015902.a0020138]
 
Hu J (2007) Plant peroxisome multiplication: highly regulated and still enigmatic (invited review). J Int Plant Biol 49(8): 1112-1118 Full Text

Hu J (2007) Toward understanding plant peroxisome proliferation (invited addendum). Plant Signal Behav 2(4): 308-310 Abstract

Kandoth PK, Ranf S, Pancholi S, Jayanty S, Miller M, Howe GA, Lincoln D, and Stratmann JW (2007) The tomato MAP kinases LeMPK1, LeMPK2, and LeMPK3 function in the systemin-mediated defense response against herbivorous insects. Proc Natl Acad Sci USA 104: 12205-12210 Abstract

Kannangara R, Branigan C, Liu Y, Penfield T, Rao V, Mouille G, Höfte H, Pauly M, Riechmann JL, Broun P (2007) Transcription factor WIN1/SHN1 regulates cutin biosynthesis in Arabidopsis thaliana. Plant Cell 19: 1278-1294 Abstract

Koo AJK, Howe GA (2007) Role of peroxisomal β-oxidation in the production of plant signaling compounds. Plant Signal Behav 2: 20-22   Abstract  

Krupkova E, Immerzeel P, Pauly M, Schmülling T (2007) The tumorous shoot development2 gene of Arabidopsis encoding a putative methyltransferase is required for cell adhesion and co-ordinated plant development. Plant J 50: 735-750 Abstract

Lee DJ, Zeevaart JAD (2007) Regulation of gibberellin 20-oxidase1 expression in spinach by photoperiod. Planta 226: 35-44 Abstract

Liepman AH, Cavalier DM, Lerouxel O, Keegstra K (2007) Cell wall structure, biosynthesis, and assembly. In Roberts JR, Gonzalez-Carranza Z, eds, Plant Cell Separation and Adhesion, Annual Plant Reviews, Vol 25, pgs 8-39

Liepman AH, Nairn CJ, Willats WGT, Sørensen I, Roberts AW, Keegstra K (2007) Functional genomic analysis supports conservation of function among cellulose synthase-like A gene family members and suggests diverse roles of mannans in plants. Plant Physiol 143: 1881-1893 Abstract

Lionetti V, Railola A, Camardella L, Giovane A, Obel N, Pauly M, Favaron F, Cervone F, Bellincampi D (2007) Overexpression of pectin methylesterase inhibitors in Arabidopsis restricts fungal infection by Botrytis cinerea. Plant Physiol 143: 1871-1880 Abstract

López-Gomollón S, Hernández JA, Wolk CP, Peleato ML, Fillat MF (2007) Expression of furA is modulated by NtcA and strongly enhanced in heterocysts of Anabaena sp. PCC 7120. Microbiology 153: 42-50 Abstract

Malnoy M, Jin Q, Borejsza-Wysocka EE, He SY, Aldwinckle HS (2007) Over-expression of the apple MpNPR1 gene confers increased disease resistance in Malus X domestica. Mol Plant-Microbe Interact 20: 1568-1580 Abstract

Matheson LA, Hanton SL, Rossi M, Latijnhouwers M, Stefano G, Renna L, Brandizzi F (2007) Multiple roles of ARF1 in plant cells include spatially regulated recruitment of coatomer and elements of the Golgi matrix. Plant Physiol 143: 1615-1627 Abstract

Montgomery BL (2007) Sensing the light: photoreceptive systems and signal transduction in cyanobacteria. Mol Microbiol 64: 16-27 Abstract

Montgomery BL (2007) Phytochrome. McGraw-Hill Yearbook of Science & Technology, McGraw Hill, New York, pp 180-183

Moreau P, Brandizzi F, Hanton SL, Chatre L, Melser S, Hawes C, Satiat-Jeunemaitre B (2007) The plant ER-Golgi interface: a highly structured and dynamic membrane complex. J Exp Bot 58: 49-64 Abstract

Orth T, Reumann S, Zhang X, Fan J, Wenzel D, Quan S, Hu J (2007) The PEROXIN11 protein family controls peroxisome proliferation in Arabidopsis. Plant Cell 19: 333-350 Abstract

Paper JM, Scott-Craig JS, Adhikari ND, Cuomo CA, Walton JD (2007) Comparative proteomics of extracellular proteins in vitro and in planta from the pathogenic fungus Fusarium graminearum. Proteomics 7: 3171-3183 Abstract

Pino MT, Skinner JS, Park EJ, Jeknic Z, Hayes PM, Thomashow MF, Chen THH (2007) Use of a stress inducible promoter to drive ectopic AtCBF expression improves potato freezing tolerance while minimizing negative effects on tuber yield.  Plant Biotech J 5: 591-604 Abstract

Rösti J, Barton CJ, Albrecht S, Dupree P, Pauly M, Findlay K, Roberts K, Seifert GJ (2007) UDP-glucose 4 epimerase isoforms UGE2 and UGE4 cooperate in providing UDP-galactose for cell wall biosynthesis and growth of Arabidopsis thaliana. Plant Cell 19: 1565-1579 Abstract

Ruckle ME, DeMarco SM, Larkin RM (2007) Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis. Plant Cell 19: 3944-3960 Abstract

Schilmiller AL, Koo AJ, Howe GA (2007) Functional diversification of acyl-CoA oxidases in jasmonic acid biosynthesis and action. Plant Physiol 143: 812-824 Full Text

Shimada H, Mochizuki M, Ogura K, Froehlich JE, Osteryoung KW, Shirano Y, Shibata D, Masuda S, Mori K, Takamiya K-i (2007)  Arabidopsis cotyledon-specific chloroplast biogenesis factor CYO1 is a protein disulfide isomerase. Plant Cell 19: 3157-3169 Abstract

Thines B, Katsir L, Melotto M, Niu Y, Mandaokar A, Liu G, Nomura K, He SY, Howe GA, Browse J (2007) JAZ repressor proteins are targets of the SCF CO11 complex during jasmonate signalling. Nature 448: 661-665 Abstract

Tripp J, Inoue K, Keegstra K, Froehlich JE (2007) A novel serine/proline-rich domain in combination with a transmembrane domain is required for the insertion of AtTic40 into the inner envelope membrane of chloroplasts. Plant J 52: 824-838 Abstract

Underwood W, Melotto M, He SY (2007) Role of plant stomata in bacterial invasion. Cell Microbiol 9: 1621-1629

Underwood W, Zhang S, He SY (2007) The Pst DC3000 type III effector tyrosine phosphatase HopAO1 suppresses innate immunity in Arabidopsis thaliana. Plant J 52: 658-672 Abstract

Wang Y, Lechno-Yossef S, Gong Y, Fan Q, Wolk CP, Xu X (2007) Predicted glycosyl transferase genes located outside of the HEP island are required for formation of heterocyst envelope polysaccharide in Anabaena sp. strain PCC 7120. J Bacteriol 189: 5372-5378

Wolk CP, Fan Q, Zhou R, Huang G, Lechno-Yossef S, Kuritz T, Wojciuch E (2007) Paired cloning vectors for complementation of mutations in the cyanobacterium Anabaena sp. strain PCC 7120. Arch Microbiol 188: 551-563 Abstract

Zhang W, Du Y, Khudyakov I, Fan Q, Gao H, Ning D, Wolk CPW, Xu X (2007) A gene cluster that regulates both heterocyst differentiation and pattern formation in Anabaena sp. strain PCC 7120. Mol Microbiol 66: 1429-1443 Abstract

Zheng S, Ponder MA, Shih JY, Tiedje JM, Thomashow MF, Lubman DM (2007) A proteomic analysis of Psychrobacter arcticus 273-4 adaptation to low temperature and salinity using a 2-D liquid mapping approach. Electrophoresis 28: 467-488 Abstract

Publications, 2006

Abdulrazzak N, Pollet B, Ehlting J, Larsen K, Asnaghi C, Ronseau S, Proux C, Erhardt M, Seltzer V, Renou JP, Ullmann P, Pauly M, Lapierre C, Werck-Reichhart D (2006) A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth. Plant Physiol 140: 30-48

Bakermans C, Ayala-del-Rio HL, Ponder MA, Vishnivetskaya T, Gilichinsky D, Thomashow MF, Tiedje JM (2006) Psychrobacter cryohalolentis sp. nov. and Psychrobacter arcticus sp. nov., isolated from Siberian permafrost. J Syst Evol Microbiol 56: 1285-1291

Bosca S, Barton CJ, Taylor NG, Ryden P, Neumetzler L, Pauly M, Roberts K, Seifert GJ (2006) Interactions between MUR10/CesA7-dependent secondary cellulose biosynthesis and primary cell wall structure. Plant Physiol 142:1353-1363

Cañoles MA, Beaudry RM, Li C, Howe GA (2006) Deficiency of linolenic acid in fad7 mutant tomato changes the volatile profile and sensory perception of disrupted leaf and fruit tissue. J Amer Soc Hort Sci 131: 284-289

Carrari F, Baxter C, Usadel B, Urbanczyk-Wochniak E, Zanor MI, Nunes-Nesi A, Nikiforova V, Centero D, Ratzka A, Pauly M, Sweetlove LJ, Fernie AR (2006) Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiol 142: 1380-1396

Cavalier DM, Keegstra K (2006) Two xyloglucan xylosyltransferases catalyze the addition of multiple xyloxyl residues to cellohexaose. J Biol Chem 281: 34197-34207

Chen H, Jones AD, Howe GA (2006) Constitutive activation of the jasmonate signaling pathway enhances the production of secondary metabolites in tomato. FEBS Lett 580: 2540-2546

Diet A, Link B, Seifert GJ, Schellenberg B, Wagner U, Pauly M, Reiter WD, Ringli C (2006) The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase. Plant Cell 18: 1630-1641

Drakakaki G, Zabotina O, Delgado I, Robert S, Keegstra K, Raikhel N (2006) Arabidopsis reversibly glycosylated polypeptides 1 and 2 are essential for pollen development. Plant Physiol 142: 1480-1492

Dunkley TP, Hester S, Shadforth IP, Runions J, Weimar T, Hanton SL, Griffin JL, Bessant C, Brandizzi F, Hawes C, Watson RB, Dupree P, Lilley KS (2006) Mapping the Arabidopsis organelle proteome. Proc Natl Acad Sci USA  103: 6518-6523

Fan Q, Lechno-Yossef S, Ehira S, Kaneko T, Ohmori M, Sato N, Tabata S, Wolk CP (2006) Signal transduction genes required for heterocyst maturation in Anabaena sp. strain PCC 7120. J Bacteriol 188: 6688-6693

Flores E, Herrero A, Wolk CP, Maldener I (2006) Is the periplasm continuous in filamentous multicellular cyanobacteria? Trends Microbiol 14: 439-443

Hanton SL, Brandizzi F (2006) Fluorescent proteins as markers in the plant secretory pathway. Microsc Res Tech 69: 152-159

Hanton SL, Matheson LA, Brandizzi F (2006) Seeking a way out: export of proteins from the plant endoplasmic reticulum. Trends Plant Sci 11: 335-343

Harholt J, Jensen JK, Sorensen SO, Orfila C, Pauly M, Scheller HV (2006) ARABINAN DEFICIENT 1 is a putative arabinosyltransferase involved in biosynthesis of pectic arabinan in Arabidopsis. Plant Physiol 140: 49-58

He SY, Bray Speth E, DebRoy S, Hauck P, Melotto M, Nomura K, Underwood W (2006) Suppression of basal innate immunity in Arabidopsis by Pseudomonas syringae. In F Sanchez, C Quinto, IM Lopez-Lara, eds, Biology of Plant-Microbe Interactions, Vol 5, IS-MPMI, St. Paul, MN, pp 236-241

Keegstra K (2006) The biochemistry of plant polysaccharide biosynthesis: four decades and counting.  In Hayashi T (ed) The Science and Lore of the Plant Cell Wall: Biosynthesis, Structure, & Function. Boca Raton, FL, Brown Walker Press, pp 71-77

Keegstra K, Walton J (2006) Beta-glucans—brewer’s bane, dietician’s delight. Science 31: 1872-1873

Ko J-H, Kim J H, Jayanty S, Howe GA, Han K-H (2006) Loss of function of COBRA, a determinant of oriented cell expansion, invokes cellular defence responses in Arabidopsis thaliana. J Exp Bot 57: 2923-2936

Koo AJK, Chung HS, Kobayashi Y, Howe GA (2006) Identification of a peroxisomal acyl-activating enzyme involved in the biosynthesis of jasmonic acid in Arabidopsis. J Biol Chem 281: 33511-33520. Selected JBC Paper of the Week.

Larkin RM (2006) Intracellular signaling and chlorophyll synthesis. In B Demmig-Adams, WW Adams III, A Mattoo, eds, Photoprotection, Photoinhibition, Gene Regulation, and Environment. New York: Kluwer Press, pp 289-301

Larkin RM, Chory J (2006) A role for chlorophyll precursors in plastid-to-nucleus signaling.  In E Schaefer, F Nagy, eds, Photomorphogenesis in Plants and Bacteria: Function and Signal Transduction Mechanisms, New York: Kluwer Press, pp 499-513

Lechno-Yossef S, Fan Q, Ehira S, Sato N, Wolk CP (2006) Mutations in four regulatory genes have interrelated effects on heterocyst maturation in Anabaena sp. strain PCC 7120. J Bacteriol 188: 7387-95

Lerouxel O, Cavalier DM, Liepman AH, Keegstra K (2006) Biosynthesis of plant cell wall polysaccharides—a complex process. Curr Opin Plant Biol 9: 621-630

Mao Y, Pavangadkar KA, Thomashow MF, Triezenberg SJ (2006) Physical and functional interactions of Arabidopsis ADA2 transcriptional coactivator proteins with the acetyltransferase GCN5 and with the cold-induced transcription factor CBF1.  Biochim Biophys Acta—Gene Structure and Exp 1759: 69-79

Matheson LA, Hanton SL, Brandizzi F (2006) Traffic between the plant endoplasmic reticulum and Golgi apparatus: to the Golgi and beyond. Curr Opin Plant Biol 9: 601-609

Melotto M, Underwood W, Koczan J, Nomura K, He SY (2006) Plant stomata function in innate immunity against bacterial invasion. Cell 126: 969-980

Miyagishima SY, Froehlich JE, Osteryoung KW (2006) PDV1 and PDV2 mediate recruitment of the dynamin-related protein ARC5 to the plastid division site. Plant Cell 18: 2517-2530

Montgomery BL (2006) Plant photoreceptors and the photoperiodic induction of flowering. In JA Teixeira da Silva ed, Floriculture, Ornamental and Plant Biotechnology: Advances and Topical Issues (1st Edition). Global Science Books, London, UK, pp 256-262

Moreau P, Brandizzi F, Hanton S, Chatre L, Melser S, Hawes C, Satiat-Jeunemaitre B (2006) The plant ER-Golgi interface: a highly structured and dynamic membrane complex. J Exp Bot 58: 49-64

Mouille G, Witucka-Wall H, Bruyant MP, Loudet O, Pelletier S, Rihouey C, Lerouxel O, Lerouge P, Hofte H, Pauly M (2006) Quantitative trait loci analysis of primary cell wall composition in Arabidopsis. Plant Physiol 141: 1035-1044

Nomura K, DebRoy S, Lee YH, Pumplin N, Jones J, He SY (2006) A bacterial virulence protein suppresses host innate immunity to cause plant disease. Science 313: 220-223

Obel N, Neumetzler L, Pauly M (2006) Hemicelluloses and cell expansion. In Verbelen C, Vissenberg K, eds, The Expanding Cell. Springer publishing, Dordrecht, pp 57-88

Oh K, Asami T, Matsui K, Howe GA, Murofushi N (2006) Characterization of novel imidazole derivative, JM-8686, a potent inhibitor of allene oxide synthase. FEBS Lett 580: 5791-5796

Osbourn A, He SY (2006) Biotic interactions: Towards a unifying and balanced view. Curr Opin Plant Biol 9: 347-350

Powers RA, Rife CL, Schilmiller AL, Howe GA, Garavito RM (2006) Structure determination and analysis of acyl-CoA oxidase (ACX1) from tomato. Acta Crystallogr D 62: 683-686

Rodrigues DF, Goris J, Vishnivetskaya T, Gilichinsky D, Thomashow MF, Tiedje JM (2006) Characterization of Exiguobacterium isolates from the Siberian permafrost. Description of Exiguobacterium sibiricum sp. nov. Extremophiles 10: 285-294

Shang Y, Li X, Cui H, He P, Thilmony R, Chintamanani S, Zwiesler-Vollick J, Gopalan S, Tang X, Zhou JM (2006) RAR1, a central player in plant immunity, is targeted by Pseudomonas syringae effector AvrB. Proc Natl Acad Sci USA 103: 19200–19205

Skinner JS, Szacs P, von Zitzewitz J, Marquez-Cedillo L, Filichikin T, Stockinger EJ, Thomashow MF, Chen TH, Hayes PM (2006) Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis. Theor Appl Genet 112: 832-842

Stefano G, Renna L, Hanton SL, Chatre L, Haas TA, Brandizzi F (2006) ARL1 plays a role in the binding of the GRIP domain of a peripheral matrix protein to the Golgi apparatus in plant cells. Plant Mol Biol 61: 431-449

Stefano G, Renna L, Chatre L, Hanton SL, Moreau P, Hawes C, Brandizzi F (2006) In tobacco leaf epidermal cells, the integrity of protein export from the endoplasmic reticulum and of ER export sites depends on active COPI machinery. Plant J 46: 95-110

Thilmony R, Underwood W, He SY (2006) Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. Plant J 46: 34-53

Van Buskirk HA, Thomashow MF (2006) Arabidopsis transcription factors regulating cold acclimation. Physiol Plant 126: 72-80

Walton JD (2006) Molecules of interest: HC-toxin. Phytochemistry 67:1406-1413

Walton JD, Ohtani K, Baidyaroy D, Tonukari NJ, Pedley KF, Scott-Craig JS (2006) General and specific virulence factors in fungal pathogens. In F Sanchez, ed, Biology of Plant-Microbe Interactions, Vol 5, APS Press, St. Paul, Minnesota, pp 586-596

Xu C, Yu B, Cornish AJ, Froehlich JE, Benning C (2006) Phosphatidylglycerol biosynthesis in chloroplasts of Arabidopsis mutants deficient in acyl-ACP glycerol 3-phosphate acyltransferase. Plant J 47: 296-309

Yang SH, Zeevaart JAD (2006) Expression of ABA 8´-hydroxylases in relation to leaf water relations and seed development in bean. Plant J 47: 675-686

Zeevaart JAD (2006) Florigen coming of age after 70 years. Plant Cell 18: 1783-1789

Zhao Y, He S-Y, Sundin GW (2006) The Erwinia amylovora avrRPT2EA gene contributes to virulence on pear and AvrRpt2EA is recognized by Arabidopsis RPS2 when expressed in Pseudomonas syringae. Mol Plant Microbe Interact 19: 644-654

Zhou Y, Niu H, Brandizzi F, Fowke LC, Wang H (2006) Molecular control of nuclear and subnuclear targeting of the plant CDK inhibitor ICK1 and ICK1-mediated nuclear transport of CDKA. Plant Mol Biol 62: 261-278

Publications, 2005

Fan Q, Huang G, Lechno-Yossef S, Wolk CP, Kaneko T, Tabata S (2005) Clustered genes required for synthesis and deposition of envelope glycolipids in Anabaena sp. strain PCC 7120. Mol Microbiol 58: 227-243

Fan J, Quan S, Orth T, Awai C, Chory J, Hu J (2005) The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development. Plant Physiol 139: 231-239

Fowler SG, Cook D, Thomashow MF (2005) Low temperature induction of Arabidopsis CBF1, 2, and 3 is gated by the circadian clock. Plant Physiol 137: 961-968

Huang G, Fan Q, Lechno-Yossef S, Wojciuch E, Wolk CP, Kaneko T, Tabata S (2005) Clustered genes required for the synthesis of heterocyst envelope polysaccharide in Anabaena sp. strain PCC 7120. J Bacteriol 187: 1114-1123

Lee DJ, Zeevaart JAD (2005) Molecular cloning of GA 2-oxidase3 from spinach and its ectopic expression in Nicotiana sylvestris. Plant Physiol 138: 243-254

Lee YH, Kolade OO, Nomura K, Arvidson DN, He SY (2005) Use of dominant-negative HrpA mutants to dissect Hrp pilus assembly and type III secretion in Pseudomonas syringae pv. tomato. J Biol Chem 280: 21409-21417

Leganés F, Blanco-Rivero A, Fernández-Piñas F, Redondo M, Fernández-Valiente E, Fan Q, Lechno-Yossef S, Wolk CP (2005) Wide variation in the cyanobacterial complement of presumptive penicillin-binding proteins. Arch Microbiol 184: 234-248

Li C, Schilmiller AL, Liu G, Lee GI, Jayanty S, Sageman C, Vrebalov J, Giovannoni JJ, Yagi K, Kobayashi Y, Howe GA (2005) Role of ß-oxidation in jasmonate biosynthesis and systemic wound signaling in tomato. Plant Cell 17: 971-986

Liepman AH, Wilkerson CG, Keegstra K (2005) Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. Proc Natl Acad Sci USA 102: 2221-2226 [Related Commentary: Dhugga KS (2005) Plant Golgi cell wall synthesis: From genes to enzyme activities. 102: 1815-1816]

Miyagashima S-y, Wolk CP, Osteryoung KW (2005) Identification of cyanobacterial cell division genes by comparative and mutational analyses. Mol Microbiol 56: 126-143

Nomura K, He SY (2005) Powerful screens for bacterial virulence proteins. Proc Natl Acad Sci USA 102: 3527-3528

Nomura K, Melotto M, He S-Y (2005) Suppression of host defense in compatible plant- Pseudomonas syringae interactions. Curr Opin Plant Biol 8: 361-368

Ponder MA, Gilmour SJ, Bergholz PW, Mindock CA, Hollingsworth R, Thomashow MF, Tiedje JM (2005) Characterization of potential stress responses in ancient Siberian permafrost psychroactive bacteria. FEMS Microb Ecol 53: 103-115

Ramírez ME, Hebbar PB, Zhou R, Wolk CP, Curtis SE (2005) Anabaena sp. strain PCC 7120 gene devH is required for synthesis of the heterocyst glycolipid layer. J Bacteriol 187 : 2326-2331

Reumann S, Inoue K, Keegstra K (2005) Evolution of the general protein import pathway of plastids. Mol Membrane Biol 22: 73-86

Schilmiller AL, Howe GA (2005) Systemic signaling in the wound response. Curr Opin Plant Biol 8: 369-377

Verdecia MA, Larkin RM, Ferrer J-L, Riek R, Chory J, Noel JP (2005) Structure of the Mg-chelatase cofactor GUN4 reveals a novel hand-shaped fold for porphyrin binding. PLoS Biol 3 (5): e151

Vogel JT, Zarka DG, Van Buskirk HA, Fowler SG, Thomashow MF (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. Plant J 41: 195-211